This again is with Galaxy2.2test My history panel was replaced by a large Server Error message, and I cannot see any way to get back to a history: Server Error URL: http://g2.bx.psu.edu:8889/history Module paste.exceptions.errormiddleware:138 in __call__ Module paste.lint:65 in lint_app Module flup.middleware.session:743 in __call__ Module paste.recursive:54 in __call__ Module paste.httpexceptions:619 in __call__ Module paste.wsgilib:112 in catch_errors_app Module galaxy.web.framework:104 in __call__
body = method( trans, **kwargs ) Module galaxy.interfaces.root:67 in history return trans.fill_template(template, history=history, mode=mode ) Module galaxy.web:153 in fill_template return str(template) Module Cheetah.Template:175 in respond Module galaxy.model:166 in display_info return self.datatype.display_info( self ) Module galaxy.datatypes.data:27 in display_info return escape(dataset.info) Module cgi:1039 in escape s = s.replace("&", "&") # Must be done first! exceptions.AttributeError: 'NoneType' object has no attribute 'replace' extra data
CGI Variables HTTP_ACCEPT '*/*' HTTP_ACCEPT_ENCODING 'gzip, deflate' HTTP_ACCEPT_LANGUAGE 'en' HTTP_CONNECTION 'keep-alive' HTTP_COOKIE 'universe=125; universe_user=12; universe_ui=info704' HTTP_HOST 'g2.bx.psu.edu:8889' HTTP_IF_MODIFIED_SINCE 'Sat, 22 Apr 2006 11:52:13 GMT' HTTP_REFERER 'http://g2.bx.psu.edu:8889/history' HTTP_USER_AGENT 'Mozilla/5.0 (Macintosh; U; PPC Mac OS X; en) AppleWebKit/418 (KHTML, like Gecko) Safari/417.9.2' PATH_INFO '/history' REMOTE_ADDR '69.162.62.23' REMOTE_HOST '69-162-62-23.stcgpa.adelphia.net' REQUEST_METHOD 'GET' SERVER_NAME '128.118.201.89' SERVER_PORT '8889' SERVER_PROTOCOL 'HTTP/1.1' Configuration __file__ '/var/opt/universe/james-wsgi/universe_wsgi.ini' database_file 'database/universe.sqlite' debug 'true' file_path 'database/files' here '/var/opt/universe/james-wsgi' job_queue_workers '5' template_path 'templates' test_conf 'test.conf' tool_config_file 'tool_conf.xml' tool_path 'tools' use_interactive 'False' WSGI Variables application <function lint_app at 0xb6d85a3c> com.saddi.service.session <flup.middleware.session.SessionService object at 0xadc3a22c> paste.cookies (<SimpleCookie: universe='125' universe_ui='info704' universe_user='12'>, 'universe=125; universe_user=12; universe_ui=info704') paste.expected_exceptions [<class paste.httpexceptions.HTTPException at 0xb7b746ec>] paste.httpexceptions <paste.httpexceptions.HTTPExceptionHandler instance at 0xb6d8650c> paste.parsed_formvars ({}, ('', <paste.lint.InputWrapper instance at 0xadc3a5ac>, 'GET', False, True)) paste.printdebug_listeners [<cStringIO.StringO object at 0xadc3a020>, <paste.script.serve.LazyWriter object at 0xb7c7378c>] paste.recursive.forward <paste.recursive.Forwarder from /> paste.recursive.include <paste.recursive.Includer from /> paste.recursive.script_name '' paste.remove_printdebug <function remove_printdebug at 0xae2ed87c> paste.throw_errors True wsgi process 'Multithread CGI (?)' full traceback URL: http://g2.bx.psu.edu:8889/history Module paste.exceptions.errormiddleware:138 in __call__ Module paste.lint:65 in lint_app Module flup.middleware.session:743 in __call__ Module paste.recursive:54 in __call__ Module paste.httpexceptions:619 in __call__ Module paste.wsgilib:112 in catch_errors_app Module galaxy.web.framework:104 in __call__
body = method( trans, **kwargs ) Module galaxy.interfaces.root:67 in history return trans.fill_template(template, history=history, mode=mode ) Module galaxy.web:153 in fill_template return str(template) Module Cheetah.Template:175 in respond Module galaxy.model:166 in display_info return self.datatype.display_info( self ) Module galaxy.datatypes.data:27 in display_info return escape(dataset.info) Module cgi:1039 in escape s = s.replace("&", "&") # Must be done first! exceptions.AttributeError: 'NoneType' object has no attribute 'replace'
text version URL: http://g2.bx.psu.edu:8889/history File 'build/bdist.darwin-8.5.1- i386/egg/paste/exceptions/errormiddleware.py', line 138 in __call__ File 'build/bdist.darwin-8.5.1-i386/egg/paste/lint.py', line 65 in lint_app File '/var/opt/universe/james-wsgi/eggs/flup-0.5-py2.4.egg/ flup/middleware/session.py', line 743 in __call__ File 'build/ bdist.darwin-8.5.1-i386/egg/paste/recursive.py', line 54 in __call__ File 'build/bdist.darwin-8.5.1-i386/egg/paste/httpexceptions.py', line 619 in __call__ File 'build/bdist.darwin-8.5.1-i386/egg/paste/ wsgilib.py', line 112 in catch_errors_app File '/var/opt/universe/ james-wsgi/galaxy/web/framework.py', line 104 in __call__ body = method( trans, **kwargs ) File '/var/opt/universe/james-wsgi/galaxy/ interfaces/root.py', line 67 in history return trans.fill_template (template, history=history, mode=mode ) File '/var/opt/universe/james- wsgi/galaxy/web/__init__.py', line 153 in fill_template return str (template) File '<string>', line 175 in respond File '/var/opt/ universe/james-wsgi/galaxy/model/__init__.py', line 166 in display_info return self.datatype.display_info( self ) File '/var/opt/ universe/james-wsgi/galaxy/datatypes/data.py', line 27 in display_info return escape(dataset.info) File '/usr/lib/python2.4/ cgi.py', line 1039 in escape s = s.replace("&", "&") # Must be done first! exceptions.AttributeError: 'NoneType' object has no attribute 'replace' Ross Hardison T. Ming Chu Professor of Biochemistry and Molecular Biology The Pennsylvania State University 304 Wartik Laboratory University Park, PA 16802 e-mail: rch8@psu.edu phone: 814-863-0113 FAX: 814-863-7024