I will try and be a little more specific. I have a tool, it runs and produces the output files it would produce on the shell. Here is the history: ------------------------------------------------------- Info: $Id: PedCount.pl 2408 2009-11-13 17:29:39Z whv001 $ -post flag seen -count flag seen -write seen, using "/export/home/galaxy/galaxy-dist/database/files/000/dataset_25.dat" prefix Marker set 1 Bucketizing reduces evaluation count from 1140 to 470, or by 58 ------------------------------------------------------ I can see the files on disk in : /export/home/galaxy/galaxy-dist/database/files/000/ How can I view them from within galaxy, and download them Thanks Olaf ------------------------- Olaf Stein DBA Battelle Center for Mathematical Medicine Nationwide Children's Hospital, The Research Institute 700 Children's Drive 43205 Columbus, OH phone: 1-614-355-5685 cell: 1-614-843-0432 email: olaf.stein@nationwidechildrens.org "I consider that the golden rule requires that if I like a program I must share it with other people who like it." Richard M. Stallman ------ Forwarded Message From: Olaf Stein <olaf.stein@nationwidechildrens.org> Date: Tue, 09 Mar 2010 11:59:33 -0500 To: "galaxy-user@lists.bx.psu.edu" <galaxy-user@lists.bx.psu.edu> Conversation: Output files Subject: Output files Hi all, I have a tool setup (a small perl script) and it runs fine, I get the output I would usually see in shell in the history. The script also generates some output files (at least in a normal run in the shell), where within galaxy can I see those? Thanks Olaf ------------------------- Olaf Stein DBA Battelle Center for Mathematical Medicine Nationwide Children's Hospital, The Research Institute 700 Children's Drive 43205 Columbus, OH phone: 1-614-355-5685 cell: 1-614-843-0432 email: olaf.stein@nationwidechildrens.org "I consider that the golden rule requires that if I like a program I must share it with other people who like it." Richard M. Stallman ------ End of Forwarded Message