Hi all,
<div><br></div><div>It seems that the more recent &quot;mpileup&quot; tool that is a part of SAMtools offer better indel prediction than the current &quot;pileup&quot; tool.</div><div><br></div><div>I&#39;ve found the following thread</div>

<div><span class="Apple-style-span" style="font-family: Helvetica; font-size: 12px; "><a href="http://gmod.827538.n3.nabble.com/samtools-mpileup-update-td3277940.html" target="_blank">http://gmod.827538.n3.nabble.com/samtools-mpileup-update-td3277940.html</a></span></div>

<div>...and the following issue</div><div><span class="Apple-style-span" style="font-family: Helvetica; font-size: 12px; "><a href="https://bitbucket.org/galaxy/galaxy-central/issue/524/implement-wrappers-for-mpileup-and" target="_blank">https://bitbucket.org/galaxy/galaxy-central/issue/524/implement-wrappers-for-mpileup-and</a></span></div>

<div>...regarding the topic.</div><div><br></div><div>Is there community demand for this new tool implementation in Galaxy, or is it already in the works?</div><div><br></div><div>Thanks,</div><div>Keith Funkhouser</div>