I was wondering if it is some how possible in galaxy to format FAST genome seq file of microbial genome to format to generate bowtie index so that it can be used for RNA seq analysis using TopHat.  Alternatively any pointer to an available tool which can generate index files.<div>
<br></div><div>Thanks<br><div><br></div><div><br></div><div>Kanwar</div><div><br></div></div>