Amit,
 
Extract Genomic DNA seq option in Galaxy will be useful.
 
Vasu

--- On Thu, 4/14/11, pande <pande@uni-muenster.de> wrote:

From: pande <pande@uni-muenster.de>
Subject: [galaxy-user] extraction of intervals
To: galaxy-user@lists.bx.psu.edu
Date: Thursday, April 14, 2011, 8:14 AM

Dear Galaxy,
                     I have two ChIP reads and want to extract the regions in between them . For example chr1:66585377-66585400 and  chr1:66585616-66585639 and now I would like to extract the region beginning from  665855401 up to  66585615.
Can I get help from Galaxy tools.

regards,
Amit

___________________________________________________________
The Galaxy User list should be used for the discussion of
Galaxy analysis and other features on the public server
at usegalaxy.org.  Please keep all replies on the list by
using "reply all" in your mail client.  For discussion of
local Galaxy instances and the Galaxy source code, please
use the Galaxy Development list:

http://lists.bx.psu.edu/listinfo/galaxy-dev

To manage your subscriptions to this and other Galaxy lists,
please use the interface at:

http://lists.bx.psu.edu/