Dear users,

Has anyone encountered this problem before? I wrote a shell script which among other things calls some R scripts like this..

Rscript rscript_to_use.R

When I run it via terminal it's fine plus I have verified Rscript works. But when I upload my tool to Galaxy and try to run it I get the following error:

/path/to/script/shell_script.sh: line 26: Rscript: command not found


Can anyone help?

Thank you in advance,
Makis Ladoukakis