Makais,
Any type of command line tool, whether script or a binary executable, can be used by Galaxy as long as it's properly installed on the system and accessible to the Galaxy user.
See http://wiki.g2.bx.psu.edu/Admin/Tools/Tool%20Config%20Syntax#A.3Ccommand.3E_... for more details on how you might call a compiled executable.
Thanks for using Galaxy,
-Dannon
On Oct 6, 2011, at 7:44 AM, Makis Ladoukakis wrote:
Dear Galaxy developers,
Currently I am adding new tools to my galaxy instance as scripts written in Perl language. I was wandering if there is a way to add tools either as .bin or .exe format or if only scripts are supported. I couldn't find anything about it in the wiki or in the FAQ.
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