I did close the web browser and opened it again
was that enough?


From: Greg Von Kuster <greg@bx.psu.edu>
To: Alejandra Rougon <alerougon@yahoo.com>
Cc: Jennifer Jackson <jen@bx.psu.edu>; "galaxy-user@lists.bx.psu.edu" <galaxy-user@lists.bx.psu.edu>; "closeticket@galaxyproject.org" <closeticket@galaxyproject.org>
Sent: Thursday, 1 March 2012, 12:46
Subject: Re: [galaxy-user] Speed up uploading into local Galaxy, terribly slow!!

Do you restart your Galaxy server when you make changes to universe_wsgi.ini (like adding / uncommenting email addresses for the admin_users setting)?


On Mar 1, 2012, at 12:56 PM, Alejandra Rougon wrote:

Thanks Jennifer, I already uncomment and add my email address but still the admin link does not appear. I then registered my email in users and logged in with that email address and I still don't see the link.
when I type /admin at  the of the url it says that I have to be logged in as an administrator.
sorry I am a newbe on this admin stuff.
 
From: Jennifer Jackson <jen@bx.psu.edu>
To: Alejandra Rougon <alerougon@yahoo.com>
Cc: "galaxy-user@lists.bx.psu.edu" <galaxy-user@lists.bx.psu.edu>; "closeticket@galaxyproject.org" <closeticket@galaxyproject.org>
Sent: Tuesday, 28 February 2012, 17:19
Subject: Re: [galaxy-user] Speed up uploading into local Galaxy, terribly slow!!

Hi,

You will want to assign yourself as an administrator in the
universe_wsgi.ini file.

# Administrative users - set this to a comma-separated list of valid Galaxy
# users (email addresses).  These users will have access to the Admin
section
# of the server, and will have access to create users, groups, roles,
# libraries, and more.  For more information, see:
# http://wiki.g2.bx.psu.edu/Admin/Interface
#admin_users = None
^^ uncomment and add your login email here

Other wikis that may be helpful, especially if user login is not yet set up:
http://wiki.g2.bx.psu.edu/Admin/Config/Performance/Production%20Server
http://wiki.g2.bx.psu.edu/Admin/Config

Hopefully this helps,

Jen
Galaxy team

On 2/28/12 2:59 PM, Alejandra Rougon wrote:
>
> Thank you Greg, I saw the wiki but I do not see the admin link in my
> galaxy interface. How do you open galaxy as an administrator?
> t
> ------------------------------------------------------------------------
> *From:* Greg Von Kuster <greg@bx.psu.edu>
> *To:* Alejandra Rougon <alerougon@yahoo.com>
> *Cc:* "galaxy-user@lists.bx.psu.edu" <galaxy-user@lists.bx.psu.edu>
> *Sent:* Tuesday, 28 February 2012, 14:02
> *Subject:* Re: [galaxy-user] Speed up uploading into local Galaxy,
> terribly slow!!
>
> You can upload your large file to Galaxy data libraries using a
> combination of "Upload files from filesystem paths" and "Do not copy
> data into Galaxy's default file store".
>
> See this wiki:
>
> http://wiki.g2.bx.psu.edu/Admin/Data%20Libraries/Uploading%20Library%20Files
>
> For all of the information on Galaxy data libraries, see this wiki:
>
> http://wiki.g2.bx.psu.edu/Admin/Data%20Libraries/Libraries
>
> Greg Von Kuster
>
>
> On Feb 28, 2012, at 2:54 PM, Alejandra Rougon wrote:
>
>> Hello, I tried to search in the forums and although this question has
>> appeared many times I still don't have a solution.
>>
>> I cannot manage to upload big files into the local galaxy, it just
>> takes ages. Can I not just copy and paste into a local directory? why
>> do I have to upload the files if it is already installed locally?
>> I do not have a server webpage in order to use the url address option
>> If I do it through ftp (locally) what ftp address shall I put? ftp
>> localhost:8080??
>>
>> Is there any other option to speed up uploading, is so slow that is no
>> longer worth using it, please help me!
>>
>> ___________________________________________________________
>> The Galaxy User list should be used for the discussion of
>> Galaxy analysis and other features on the public server
>> at usegalaxy.org <http://usegalaxy.org>. Please keep all replies on
>> the list by
>> using "reply all" in your mail client. For discussion of
>> local Galaxy instances and the Galaxy source code, please
>> use the Galaxy Development list:
>>
>> http://lists.bx.psu.edu/listinfo/galaxy-dev
>>
>> To manage your subscriptions to this and other Galaxy lists,
>> please use the interface at:
>>
>> http://lists.bx.psu.edu/
>
>
>
>
>
> ___________________________________________________________
> The Galaxy User list should be used for the discussion of
> Galaxy analysis and other features on the public server
> at usegalaxy.org.  Please keep all replies on the list by
> using "reply all" in your mail client.  For discussion of
> local Galaxy instances and the Galaxy source code, please
> use the Galaxy Development list:
>
>    http://lists.bx.psu.edu/listinfo/galaxy-dev
>
> To manage your subscriptions to this and other Galaxy lists,
> please use the interface at:
>
>    http://lists.bx.psu.edu/

--
Jennifer Jackson
http://usegalaxy.org
http://galaxyproject.org/wiki/Support


___________________________________________________________
The Galaxy User list should be used for the discussion of
Galaxy analysis and other features on the public server
at usegalaxy.org.  Please keep all replies on the list by
using "reply all" in your mail client.  For discussion of
local Galaxy instances and the Galaxy source code, please
use the Galaxy Development list:

 http://lists.bx.psu.edu/listinfo/galaxy-dev

To manage your subscriptions to this and other Galaxy lists,
please use the interface at:

 http://lists.bx.psu.edu/