I am having problem with starting my query. For days it is showing "Job waiting to run". Is the system backed up and there is a long queue? or is there a problem with my query? Normally if there is any problem it shows an error message. I am within the usage limits. I am trying to map my SOLiD data set to custom reference genome (fasta format). I converted the SOLiD output to fastq. Then I am using Map with Bowtie for SOLiD. Everything went fine quickly except the last step, which waiting for over 6 days now. Any help or suggestions appreciated.
Thank you,
Neel
Neel Aluru Assistant Scientist Biology Department Redfield Building 3-04 Woods Hole Oceanographic Institution 45, Water Street Woods Hole, MA