Hi, is it possible to run Map with Bowtie for Illumina (version 1.1.2) in –v alignment mode/ If so, what settings do I need to enter? Many thanks, Marc.

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Professor Marc R. Knight,
Director,

Durham Centre for Crop Improvement Technology,

School of Biological and Biomedical Sciences,
Durham University,
South Road,
Durham DH1 3LE.
Tel: +44 191 33 41224
Fax: +44 191 33 41201
Website: http://www.dur.ac.uk/dccit/
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