Hello Alex, File extensions are an unchangeable function of many of the 3rd party tools wrapped in Galaxy. The best work-around advice is to just rename the output as a post-processing step. Thanks! Jen Galaxy team On 10/3/10 11:29 PM, Bossers, Alex wrote:
Hi all, I am probably missing something very obvious. I am struggling to make a tool config file (and/or perl/bash wrapper) that runs some tools that have several input files (no problem) but also several FIXED name output files. I am able to give it some prefix but the extensions (if any) cannot be changed. Any help appreciated how to link/get this in $output. Alex
_______________________________________________ galaxy-user mailing list galaxy-user@lists.bx.psu.edu http://lists.bx.psu.edu/listinfo/galaxy-user
-- Jennifer Jackson http://usegalaxy.org