Chipboy101: There is a VERY old screencast (Galaxy looked different back in 2008 and the screencast is non streamable) that you can download from here (~a 15 Mb file): http://screencast.g2.bx.psu.edu/old/geneNames.mov it is a quicktime movie. This should get you on the right track in terms of going from gene names to genomic coordinates. Let us know if you have problems. anton galaxy team On Oct 29, 2010, at 10:16 AM, CCT Hindmarch, Henry Wellcome Laboratories Integrated Neuroscienc wrote:
Hi,
I am playing with Galaxy ahead of getting ChipSeq data and it looks brilliant (thanks)...
I wonder whether It is possible to input a list of genes from a standard microarray experiment, identify the promotor regions of each gene and then work out which Transcription factor binding sites are contained in this gene list? Maybe a silly question, but this would be very useful information for me...
All the best
Charlie (chipboy101)
---------------------- Dr CCT Hindmarch Henry Wellcome Laboratories Integrated Neuroscience and Endocrinology _______________________________________________ galaxy-user mailing list galaxy-user@lists.bx.psu.edu http://lists.bx.psu.edu/listinfo/galaxy-user
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