On Thu, Sep 10, 2009 at 9:15 AM, Daniel Klevebring <daniel.klevebring@gmail.com> wrote:

Hi again,

Thanks for the fix, I have pulled and updated and saving workflows now work nicely. Running the though...

When I (on my local mirror!) click on a workflow to run it, I get the following error message:

URL: http://russola:8080/workflow/run?id=cb227cec8ca83994
File 'build/bdist.linux-x86_64/egg/weberror/evalexception/middleware.py', line 364 in respond
app_iter = self.application(environ, detect_start_response)
File 'build/bdist.linux-x86_64/egg/paste/debug/prints.py', line 98 in __call__
File 'build/bdist.linux-x86_64/egg/paste/wsgilib.py', line 539 in intercept_output
File 'build/bdist.linux-x86_64/egg/paste/recursive.py', line 80 in __call__
File 'build/bdist.linux-x86_64/egg/paste/httpexceptions.py', line 632 in __call__
File '/home/daniel.klevebring/galaxy_dist/lib/galaxy/web/framework/base.py', line 125 in __call__
body = method( trans, **kwargs )
File '/home/daniel.klevebring/galaxy_dist/lib/galaxy/web/controllers/workflow.py', line 623 in run
incoming=kwargs )
File '/home/daniel.klevebring/galaxy_dist/lib/galaxy/web/framework/__init__.py', line 574 in fill_template
return self.fill_template_mako( filename, **kwargs )
File '/home/daniel.klevebring/galaxy_dist/lib/galaxy/web/framework/__init__.py', line 580 in fill_template_mako
template = self.webapp.mako_template_lookup.get_template( filename )
File 'build/bdist.linux-x86_64/egg/mako/lookup.py', line 85 in get_template
File 'build/bdist.linux-x86_64/egg/mako/lookup.py', line 127 in __load
File 'build/bdist.linux-x86_64/egg/mako/template.py', line 83 in __init__
SyntaxError: invalid syntax (run.mako.py, line 321)

I'm running Fedora9 and (as far as I know) followed the instructions on the wiki.

Thanks
Daniel

On Wed, Sep 9, 2009 at 10:45 PM, Greg Von Kuster <ghv2@psu.edu> wrote:
Hello Daniel,

This issue should be corrected on our main instance, and the fix is also available in the distribution. Thanks for reporting this.

Greg Von Kuster
Galaxy Development Team

Daniel Klevebring wrote:

Dear list,

I have a problem saving workflows, every time I click the save button, the dialog saying "Saving..." comes up but never disappears. I can't click on anything, bu have to reload the page. When I then check the workflow, nothing is saved. This happenes to me using Firefox3@Fedora10, Firefox3.5@MacOsX10.5 and Safari@MacOsX10.5, both on the public Galaxy and on our local copy. Has anyone else seen this?

Thanks
Daniel

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