I second that, I just ran my first run of Groomer today and I would have cancelled the top for taking too long if I didn’t know the CPU was busy.
-John
On 2/24/11 11:24 AM, "Johnson, Kory (NIH/NINDS) [C]" <johnsonko@ninds.nih.gov> wrote:
Hello,
Do you have a chart or table that projects time for Groomer to complete vs number of reads provided?
Have submitted job totaling 25M Illumina reads in FASTQ v1.3+ format and it is taking time on the order of days.
What would be helpful, if not on the development schedule is a progress bar or % completed reported as text, anything to give indication that the job submitted is processing correctly, not hung, and it can be estimated how long it will take.
Thank you,
Kory Johnson
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Kory R. Johnson, MS, PhD
Sr. Bioinformatics Scientist
www.kellygovernmentsolutions.com
Providing Contract Services For:
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National Institute of Neurological Disorders & Stroke (NINDS),
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