Is it possible to get hg18 alignments to panTro2 on the server?  

the latest are at :
http://hgdownload.cse.ucsc.edu/goldenPath/hg18/vsPanTro2/

please do NOT use the ones currently in
/depot/data1/cache/human/hg18/align/panTro2/axtNet/

 as they were run using an incorrect substitution matrix.

Thanks a lot!  
- Erika

**********************************************************

E.M. Kvikstad

Academic Computing Fellow

IGDP Genetics

Center for Comparative Genomics and Bioinformatics 

The Pennsylvania State University

208 Mueller Lab

University Park, PA 16802

(814) 863-2185

kvik@bx.psu.edu