I'm trying to joint two large intervals (one with 800,000 intervals and the other with about 350,000 intervals) using operates on intervals > join tool . I have no idea how long it should takes normaly. Two days have past and it is still runnig. Is there any limitation in file size for this tool?

Any help would be appreciated.

Regards,

Milad Bastami

PhD student of Medical Genetics

Department of Medical Genetics

Shahid Beheshti's university of Medical Science