Re: [galaxy-user] Uploading Genome from Ensembl

Can you clarify what is different between the Zv9 version of the UCSC Zebrafish and the Zv9 version of the Ensembl Zebrafish genome ? They both appear to have the identical number of 1,412,464,843 nucleotides. --Hiram ----- Original Message ----- From: "Sheena Scroggins" <Sheena.Scroggins@pnnl.gov> To: galaxy-user@bx.psu.edu Sent: Friday, November 4, 2011 2:50:13 PM Subject: [galaxy-user] Uploading Genome from Ensembl How do I upload the Zebrafish genome from Ensembl to my user history in Galaxy? I’m trying to map my RNA-Seq data using TopHat and need to map it to the Ensembl version of ZFv9, but Galaxy only has the UCSC version built in. The Ensembl version is slightly different. Thanks, Sheena