Hi,<br>   You will have to change the permission of fastqc to be executable. You can open your terminal, log as root and change it. Open your terminal, type sudo su, then it will ask your password. After you enter your password type chmod 777 <span style="color:#1f497d">/root/Programs/Galaxy/galaxy-dist/tool-data/shared/jars/FastQC/fastqc</span><br>
  Best,<br><br>Luciano<br><br>