Dear Galaxy members,

 

I am new to galaxy and just installed galaxy on aws cloud. I am testing how it works and have the following question below:

 

1.       I tried to test bowtie2 with the dataset I uploaded, however, the window for reference genome is very narrow and nothing from pull-down menu can be selected. When I omit that option to execute bowtie2, galaxy give error message for requesting reference genome. I am using hg19, should I upload myself? If so, how?

2.       Same error happen for me to run fastqc --- the reference genome selection window is way too narrow and nothing can be selected

 

Thank you very much for your inputs and helps!

Kind regards,

Kathryn