Hello,

I found Galaxy extremely helpful in the past months and I have an issue that could again be solved using your wonderful platform.

I am playing with a bunch of sequences (genome coordinates) from the human genomes that I obtained from some blast searches.

I would like to see if these exact sequences are shared by (in synteny with) chimp, orang and macaque. 

I got MAF blocks from Galaxy and played with them, but I don't see an easy solution.

It would be great if you have some suggestion about how to work with synteny using Galaxy, if possible.

Thanks a lot!

Claudio Casola

Postdoctoral fellow, Hahn Lab

Department of Biology

1001 East Third Street

Bloomington, IN 47405-3700

Indiana University

812-856-7016

ccasola@indiana.edu