Thank you for the help. I assume that if galaxy will shutting down while re-sizing, the current running jobs will be stopped. Could the running jobs be suspended which will be continuing after auto-restart? If not, I may need to wait my job finished. It will be very helpful if you can confirm this. Additional question, is there any way that I can adjust root, ebs volumes while initiating at cloudlaunch site? This would be help saving the time for the re-sizing as you mentioned. Thank you in advance, Kathryn -----Original Message----- From: Dannon Baker [mailto:dannonbaker@me.com] Sent: Thursday, December 27, 2012 10:22 AM To: Sun, Wenping [USA] Cc: galaxy-user@bx.psu.edu Subject: Re: [External] Re: [galaxy-user] galaxy cluster nodes from the cloudlaunch site In the main (non-admin) cloudman UI you'll see a little icon next to the volume size. Click this and you'll have the opportunity to enter a new size. Upon submitting this, galaxy will need to temporarily shut down, but it should be automatically restarted once the procedure is complete. Note that resizing can take quite some time (hours, even) depending on the size of the EBS volume in question. On Dec 27, 2012, at 10:09 AM, "Sun, Wenping [USA]" <Sun_Wenping@bah.com> wrote:
Thanks for the information. Would you help providing further information on expanding ebs volume via cloudman UI? Thank you in advance, Kathryn
-----Original Message----- From: dannonbaker@me.com [mailto:dannonbaker@me.com] Sent: Thursday, December 27, 2012 10:03 AM To: Sun, Wenping [USA] Cc: galaxy-user@bx.psu.edu Subject: [External] Re: [galaxy-user] galaxy cluster nodes from the cloudlaunch site
The root size for the worker nodes doesn't matter. The only thing relevant to Galaxy here are the available compute units and memory. The only storage and working space used is actually attached to the master node (the EBS volume you configure at initial launch) and shared over NFS with the workers. If you find yourself needing more space, you can expand this volume through the cloudman UI if you want.
-Dannon
Sun, Wenping [USA] wrote:
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Dear Galaxy users,
I created galaxy instance using galaxy ami the first time. When I re- launch via cloudlaunch site the 2nd time, I have question on adding cluster nodes. There are several pull-down options for the nodes type, no matter which type I choose, they always generate nodes with only 15gb. Is there other option I can have option to define the root space for the nodes?
Thank you, Kathryn ___________________________________________________________ The Galaxy User list should be used for the discussion of Galaxy analysis and other features on the public server at usegalaxy.org. Please keep all replies on the list by using "reply all" in your mail client. For discussion of local Galaxy instances and the Galaxy source code, please use the Galaxy Development list:
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