Hello,
I would like to use Galaxy to divide a very large Ilumnia fasta file
(~3GB) into separate fasta files. Is this possible on Galaxy? Here
is an example of the reads:
>HWI-ST156:535:C10GLACXX:8:1101:1195:1080 1:N:0:CGGTTGT
AAATAGAATATCACATTAAAATCACAAGCAGGACAGTGTGTGTAAAAGAAATCTTTTGTGAATTCAACGTTTATCAATTAGANNNNACGCCTACGTGTAG
>HWI-ST156:535:C10GLACXX:8:1101:1210:1102 1:N:0:CGGTTGT
ATTTATCATAACAACTTAAATCAGTCAGTGGATTTCTGTCGGTCCGGTTAGCTCGGTTGGTAAAGGCGTTTGTTCGATCGTCTGTATTTTGCAATCGGGC
I have tried the "Filter and Sort" option to try and select
sequences just by a beginning sequence (ATGC, for example) to
separate these sequences into a specific file, but I have been
unsuccessful in this.
Thank you,
Dominique