Hi Ian,

Under Operate on Genomic Intervals, you can try the "Get Flanks" tool; you can request upstream, downstream, or both of your provided regions. Please let us know if you need additional assistance.


Thanks for using Galaxy,

Dan


On Oct 10, 2011, at 6:35 AM, Ian Donaldson wrote:

Hi,

Can 'if' statements by used in 'Text manipulation' > 'Compute'?

The reason is that i have a interval file of UCSC genes, i want to identify the TSS of each and make a new interval reflecting the TSS position for each gene.  But because the TSS of a '-' stranded gene is actually the 'end' coord i want to be able to check the strand in the compute statement.

Is this possible or is there an easier way to do this inside GALAXY?

Thank you,
Ian 
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