8 Dec
2009
8 Dec
'09
4:43 p.m.
Hi, I am currently doing some ChIP-Seq experiments, to analyze the data I get from the PeakFinder of my choice I'm using the Galaxy tool from the UCSC browser to manipulate my intervals. What I have is a file in .BED format with the chromosome number, Start, End of the position and then I fetch the closest features and up to this moment everything is perfect but now that I have the positions of the nearest features to my putative binding sites I would like to get the gene symbol, description y GO for each one of them in a sort of table so as I can analyze it later on and make relationships. Is there a direct tool between Galaxy and a Gene ontology database? Any help about this topic will be appreciated. Thank you in advance.