Have you installed SGE on the same machine? If so, then you should be able to do a "locate libdrmaa.so", which should point to SGE's DRMAA library. For example, on a machine that I use, I see this: $ locate libdrmaa.so /usr/lib/libdrmaa.so /usr/lib/libdrmaa.so.1.0 $ ls /usr/lib/libdrmaa* /usr/lib/libdrmaa.so /usr/lib/libdrmaa.so.1.0 $ ls -la /usr/lib/libdrmaa.so lrwxrwxrwx 1 root root 15 Apr 18 2012 /usr/lib/libdrmaa.so -> libdrmaa.so.1.0 You may also want to try "updatedb" (again, assuming you're using Linux) to index the files on your machine. Finally, if you can't find it, then you should check if you actually have SGE installed on that machine. I like to use "dpkg" on Ubuntu/Debian and "yum" on Centos to manipulate packages. -Scott ----- Original Message -----
I'm trying to install Galaxy on our SGE cluster (using the Unified method).
I installed galaxy-dist, and now I'm on this section:
drmaa egg
The drmaa egg is provided by Galaxy, but you must tell it where your resource manager's DRMAA library is located, and this is done with the $DRMAA_LIBRARY_PATH environment variable: % export DRMAA_LIBRARY_PATH=/galaxy/lsf/7.0/linux2.6-glibc2.3-x86_64/lib/libdrmaa.so.1.0.3 % export DRMAA_LIBRARY_PATH=/galaxy/sge/lib/lx24-amd64/libdrmaa.so.1.0
However I can't locate the the file libdrmaa.so.1.0.3 anywhere. In fact I don't have have an lsf nor sge directory within galaxy-dist.
Thanks,
Greg ___________________________________________________________ The Galaxy User list should be used for the discussion of Galaxy analysis and other features on the public server at usegalaxy.org. Please keep all replies on the list by using "reply all" in your mail client. For discussion of local Galaxy instances and the Galaxy source code, please use the Galaxy Development list:
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