Hello Sachit, For now, these are in the Galaxy Distribution at http://bitbucket.org/galaxy/galaxy-dist. Look under: tools / ngs_rna / tophat2* tools / sr_mapping / bowtie2* I believe that they will be migrated to the Galaxy Main Tool Shed sometime soon: http://toolshed.g2.bx.psu.edu/ Thanks! Jen Galaxy team On 10/18/12 9:49 PM, Sachit Adhikari wrote:
Hello Everyone, Can someone please give me the link to download .py file and the wrapper(.xml) of Bowtie2 and Tophat2? Thanks
___________________________________________________________ The Galaxy User list should be used for the discussion of Galaxy analysis and other features on the public server at usegalaxy.org. Please keep all replies on the list by using "reply all" in your mail client. For discussion of local Galaxy instances and the Galaxy source code, please use the Galaxy Development list:
http://lists.bx.psu.edu/listinfo/galaxy-dev
To manage your subscriptions to this and other Galaxy lists, please use the interface at:
-- Jennifer Jackson http://galaxyproject.org