amitm@megh:~/galaxy_dist$ sudo sh setup.sh
Not overwriting existing datatypes_conf.xml
Not overwriting existing reports_wsgi.ini
Not overwriting existing tool_conf.xml
Not overwriting existing universe_wsgi.ini
Not overwriting existing tool-data/alignseq.loc
Not overwriting existing tool-data/binned_scores.loc
Not overwriting existing tool-data/blastdb.loc
Not overwriting existing tool-data/encode_datasets.loc
Not overwriting existing tool-data/liftOver.loc
Not overwriting existing tool-data/maf_index.loc
Not overwriting existing tool-data/maf_pairwise.loc
Not overwriting existing tool-data/microbial_data.loc
Not overwriting existing tool-data/phastOdds.loc
Not overwriting existing tool-data/quality_scores.loc
Not overwriting existing tool-data/regions.loc
Not overwriting existing tool-data/twobit.loc
One of the python eggs necessary to run Galaxy couldn't be downloaded
automatically.  You may want to try building it by hand with:
  python scripts/scramble.py GeneTrack
amitm@megh:~/galaxy_dist$ sudo python scripts/scramble.py GeneTrack
fetch_source(): Attempting to download
  http://genetrack.googlecode.com/files/GeneTrack-1.0.3.zip
fetch_source(): Fetched http://genetrack.googlecode.com/files/GeneTrack-1.0.3.zip
fetch_source(): Attempting to download
  http://dalchemy.com/opensource/formkit/FormKit_0.9b2.tar.gz
fetch_source(): Fetched http://dalchemy.com/opensource/formkit/FormKit_0.9b2.tar.gz
unpack_source(): Unpacked to:
  /home/amitm/galaxy_dist/scripts/scramble/build/py2.6-noplatform/GeneTrack
scramble(): Using build script /home/amitm/galaxy_dist/scripts/scramble/scripts/generic.py
scramble(): Beginning build
Traceback (most recent call last):
  File "scramble.py", line 39, in <module>
    execfile( "setup.py", globals(), locals() )
IOError: [Errno 2] No such file or directory: 'setup.py'
scramble(): Egg build failed for GeneTrack-1.0.3
amitm@megh:~/galaxy_dist$