Illumina's technical support team told me two weeks ago that Cassava 1.8 will not be released for at least six weeks. That makes it at least a month from now. Do you know anyone outside the company that has used it yet? Beyond the moaning within the cited seqanswers thread, I'd be interested in hearing any first-hand impressions. Eric Peter Cock wrote:
On Mon, Mar 21, 2011 at 1:42 PM, David K Crossman <dkcrossm@uab.edu> wrote:
Hello!
I am fairly new to using Galaxy and have a question about the FASTQ Groomer feature. I have 4 RNA-Seq raw data files that were just recently generated from Illumina’s NGS instruments.
Very recently? If they are already using Illumina's CASAVA v1.8 pipeline then the FASTQ files will already be in the Sanger FASTQ format: http://seqanswers.com/forums/showthread.php?t=8895
Peter
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