Hi Oren, This book chapter http://userwww.service.emory.edu/~eafgan/content/Galaxy_eScienceGateway.pdf, includes a high-level overview of Galaxy. (Note: that chapter will be copied to the wiki soon.) There is some API documentation. ~/scripts/api/README, ~/scripts/api/workflow_ execute.py and ~/scripts/api/example_watch_folder.py in the distribution http://wiki.g2.bx.psu.edu/News%20Briefs/2010_07_16#Initial_implementation_of... http://wiki.g2.bx.psu.edu/News%20Briefs/2011_08_30#API http://wiki.g2.bx.psu.edu/Events/GCC2011 (*Galaxy Deployment and API*presentation) http://wiki.g2.bx.psu.edu/Admin/Sample%20Tracking/Next%20Gen http://wiki.g2.bx.psu.edu/Events/GCC2011/Workflows%20and%20API Sometime in the next week I'll compile all this into a single wiki page. As far as I know there is no "How to write a runner for Galaxy" document. The closest we have is http://wiki.g2.bx.psu.edu/Admin/Config/Performance/Cluster and http://wiki.g2.bx.psu.edu/Admin/Config/Performance/Web%20Application%20Scali... Hope this helps, Dave C. On Mon, Sep 19, 2011 at 9:51 AM, Oren Livne <livne@uchicago.edu> wrote:
Dear All,
I am a software developer, new to Galaxy. Is there a detailed document about the Galaxy code architecture, API, what runners are, and how to write a runner?
I am especially interested in integrating Galaxy with an external scheduler software (I am aware of Galaxy's scheduling capabilities). I'd like to intercept Galaxy workflows and send their object model to my scheduler. I could not find this information on the Galaxy Wiki.
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