On Jul 24, 2009, at 1:19 PM, Dave Clements wrote:
Hello all,
I just scanned the recent thread started by Abhi Pratap, titled "Experience with Loading NGS data on standalone instance of galaxy"
I didn't see any mention of the SAMtools in that thread. SAMtools is a platform neutral set of formats and programs for next generations sequence data. See http://samtools.sourceforge.net/ for more.
Has the Galaxy team considered adding support for SAMtools formats? It might be a way to deal with all the NGS platforms with a single set of code.
Dave C.
--
Register now for the August GMOD Meeting: http://gmod.org/wiki/August_2009_GMOD_Meeting
_______________________________________________
galaxy-user mailing list
galaxy-user@bx.psu.edu
http://mail.bx.psu.edu/cgi-bin/mailman/listinfo/galaxy-user