Scott: 15GB file is a candidate for a FTP upload because web browsers can't usually handle this size. FTP server address is usegalaxy.org and credentials are the same you use for Galaxy (you have to use some other client outside of web browser to connect to this FTP server and upload this large file successfully e.gg FileZilla). After you finish uploading your file there you will see it in the upload tool (Get Data / Upload File) on Galaxy (when logged in). Then you will be able to start using it in history. There is an awesome screencast that shows the full process here: http://vimeo.com/75938324 Martin On Fri, Mar 14, 2014 at 1:48 PM, Scott Tighe <scott.tighe@uvm.edu> wrote:
Martin
One other thing. I believe you are incorrect about uploading using the usegalaxy.org page with a 15 gb file. That I believe that is a mistake by the Galaxy team. Maybe a clear tutorial on how to upload a 15gb file would be nice.
Thanks Again
Scott
Scott Tighe Senior Core Laboratory Research Staff Advanced Genome Technologies Core NextGen Sequencing/Flow Cytometry University of Vermont and Vermont Cancer Center 149 Beaumont ave Health Science Research Facility 303/305 Burlington Vermont 05405 802-656-2482 (AGTC)On 3/14/2014 12:52 PM, Martin Čech wrote:
Hello Scott,
there is no 'new Galaxy' that has changed the way upload works. If you were able to upload files before the February release just follow the same path. The only thing that evolved is that we added another way to upload files that we are planning to replace the old one with - but that will happen in the future.
So to reiterate once more: You can use the 'old upload' that is intact under Get Data / Upload File on the usegalaxy.org server if you have trouble using the new one.
If you have trouble using the new one please post a specific question about it.
Please do not reply to other threads with an unrelated question.
Thank you
Martin
On Fri, Mar 14, 2014 at 11:24 AM, Scott Tighe <scott.tighe@uvm.edu> wrote:
Hi Galaxy List
If anybody has some insight as to how to upload data to the new Galaxy, I sure would enjoy hearing the trick.
Scott
Scott Tighe Senior Core Laboratory Research Staff Advanced Genome Technologies Core NextGen Sequencing/Flow Cytometry University of Vermont and Vermont Cancer Center 149 Beaumont ave Health Science Research Facility 303/305 Burlington Vermont 05405 802-656-2482 (AGTC)
On 3/14/2014 10:25 AM, Jennifer Jackson wrote:
Hi Elvio,
Peter is correct - you can manage any list membership through the mailman web pages.
I found you only on this list and unsubscribed you. If you want to instead consider the galaxy-announce mailing list (low volume, general project updates), links for how to sign up are on this wiki: https://wiki.galaxyproject.org/MailingLists
Best,
Jen Galaxy team
On 3/14/14 2:58 AM, Elvio Pederzolli wrote:
Hi there can you please unsubscribe me from all Galaxy lists please
Thank you
Elvio Pederzolli
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___________________________________________________________ The Galaxy User list should be used for the discussion of Galaxy analysis and other features on the public server at usegalaxy.org. Please keep all replies on the list by using "reply all" in your mail client. For discussion of local Galaxy instances and the Galaxy source code, please use the Galaxy Development list:
http://lists.bx.psu.edu/listinfo/galaxy-dev
To manage your subscriptions to this and other Galaxy lists, please use the interface at:
To search Galaxy mailing lists use the unified search at:
___________________________________________________________ The Galaxy User list should be used for the discussion of Galaxy analysis and other features on the public server at usegalaxy.org. Please keep all replies on the list by using "reply all" in your mail client. For discussion of local Galaxy instances and the Galaxy source code, please use the Galaxy Development list:
http://lists.bx.psu.edu/listinfo/galaxy-dev
To manage your subscriptions to this and other Galaxy lists, please use the interface at:
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Martin Čech