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There have been many updates to Galaxy recently and it is possible that
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On 2/14/12 8:28 PM, Praveen Raj Somarajan wrote:
I updated galaxy recently to the latest version. Everything looks fine,
except snpEff report html view. It was displaying properly (all tables
and summary values) before the update, but the summary values are not
displaying after the update. A sample screen-shot is attached for your
reference. Could you please figure out this issue?
When I ran the same on command line, the reports were generated
correctly. I assume, something (datatypes or preview) has changed by the
update. Please let me know the work around on this?
Secondly, as we know, snpEff also generates a gene-wise annotation file
along with other results, but somehow we cannot access this file through
Galaxy. Though we see the link in the html report, but it seems the path
Let me know your suggestions.
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