Hello Amit, Sorry to hear you are having problems. Are you using the public Main Galaxy instance (http://main.g2.bx.psu.edu) or a local install? If using Main and the result is an actual error, please submit a bug report from one of the failed datasets. http://wiki.g2.bx.psu.edu/Support#Reporting_tool_errors If the result is not an error, please share a history link. "Options (gear icon) -> Share or Publish", generate link, email back to just me. For both - be certain to leave the MACS datasets and all inputs undeleted in your history. If you are working with a local install, please let us know and we can troubleshoot from there. More detail about the problem would be needed. Best, Jen Galaxy team http://wiki.g2.bx.psu.edu/Support#Error_from_tools http://wiki.g2.bx.psu.edu/Support#Reporting_tool_errors On 8/31/12 2:27 AM, Amit Pande wrote:

Dear galaxy,

I am trying to run BAM files for Peak calling using MACS and for the larger files above 2GB I am continuously getting no results. Can you please identify the source of this kind of error.

warm regards, Amit

___________________________________________________________ The Galaxy User list should be used for the discussion of Galaxy analysis and other features on the public server at usegalaxy.org. Please keep all replies on the list by using "reply all" in your mail client. For discussion of local Galaxy instances and the Galaxy source code, please use the Galaxy Development list:

http://lists.bx.psu.edu/listinfo/galaxy-dev

To manage your subscriptions to this and other Galaxy lists, please use the interface at:

http://lists.bx.psu.edu/

-- Jennifer Jackson http://galaxyproject.org