how to cancel a upload to data library?
Hi, I have made a mistake of uploading via file browser a large file through the data library function. How do I cancel it as it resumes upload whenever I start the local instance. Cheers Kevin
Hi Kevin, Eventually the process will die if you leave the browser open and running. But have you tried to just close the upload process/dataset in your history? Do this by clicking the "X" on the top right of the dataset box in the history pane. I If that seems to be stuck in your browser, next you could try to delete the entire history by using the history pane's pull down Options menu and selecting the last item "Delete". Please let us know if one of these does not resolve the issue, Best, Jen Galaxy team On 10/4/10 6:34 PM, Kevin Lam wrote:
Hi, I have made a mistake of uploading via file browser a large file through the data library function. How do I cancel it as it resumes upload whenever I start the local instance.
Cheers Kevin
_______________________________________________ galaxy-user mailing list galaxy-user@lists.bx.psu.edu http://lists.bx.psu.edu/listinfo/galaxy-user
-- Jennifer Jackson http://usegalaxy.org
Hi Kevin, Sorry for misunderstanding your question the first time ... you are asking about a library upload (not a dataset). In this case, you will have to manually change the job state in the database to 'error' to get Galaxy to stop recovering it at start up. Our developers are curious whether you are using cluster job runner and a URL or server directory upload though, since otherwise the job should have failed on its own. If there is a case through Galaxy's main tools where it doesn't fail, we'd like to track that down if you have time to help. Thanks again! Jen Galaxy team On 10/4/10 6:34 PM, Kevin Lam wrote:
Hi, I have made a mistake of uploading via file browser a large file through the data library function. How do I cancel it as it resumes upload whenever I start the local instance.
Cheers Kevin
_______________________________________________ galaxy-user mailing list galaxy-user@lists.bx.psu.edu http://lists.bx.psu.edu/listinfo/galaxy-user
-- Jennifer Jackson http://usegalaxy.org
No worries It is through dir server Not sure why it should fail on it's own (unless u mean there's a default timeout). Sure will start up the galaxy instance again to see if it's still running the slow upload. And feedback here again? Sent from my iPod On 13-Oct-2010, at 1:23 AM, Jennifer Jackson <jen@bx.psu.edu> wrote:
Hi Kevin,
Sorry for misunderstanding your question the first time ... you are asking about a library upload (not a dataset).
In this case, you will have to manually change the job state in the database to 'error' to get Galaxy to stop recovering it at start up.
Our developers are curious whether you are using cluster job runner and a URL or server directory upload though, since otherwise the job should have failed on its own. If there is a case through Galaxy's main tools where it doesn't fail, we'd like to track that down if you have time to help.
Thanks again!
Jen Galaxy team
On 10/4/10 6:34 PM, Kevin Lam wrote:
Hi, I have made a mistake of uploading via file browser a large file through the data library function. How do I cancel it as it resumes upload whenever I start the local instance.
Cheers Kevin
_______________________________________________ galaxy-user mailing list galaxy-user@lists.bx.psu.edu http://lists.bx.psu.edu/listinfo/galaxy-user
-- Jennifer Jackson http://usegalaxy.org
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