'Draw quality score Boxplot' error
Hi, I have illumina ChipSeq data and I want to use the "Draw quality score Boxplot" I run the"quality format converter (ASCII numeric)". But the "Draw quality score Boxplot" do an error "An error occurred running this job:Could not find/open font when opening font "arial", .." where is my problem? thank you so much Caroline Proux
Hi Caroline, Try to change the default font of gnuplot http://www.gnuplot.info/faq/faq.html#SECTION00090000000000000000 On Thu, Nov 24, 2011 at 3:35 PM, Caroline Proux <karo@pasteur.fr> wrote:
Hi, I have illumina ChipSeq data and I want to use the "Draw quality score Boxplot" I run the"quality format converter (ASCII numeric)". But the "Draw quality score Boxplot" do an error "An error occurred running this job:*Could not find/open font when opening font "arial", .."* * * where is my problem? thank you so much
Caroline Proux
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-- Avik Datta
Caroline, I've had this problem before and find that although the job 'fails', the boxplot is actually created. If you click on the 'eye' in the boxplot history item, you should still be able to see and save your plot. Regards, Graham Dr. Graham Etherington Bioinformatics Support Officer, The Sainsbury Laboratory, Norwich Research Park, Norwich NR4 7UH. UK Tel: +44 (0)1603 450601 On 28/11/2011 16:21, "Avik Datta" <reach4avik@gmail.com> wrote:
Hi Caroline, Try to change the default font of gnuplot
http://www.gnuplot.info/faq/faq.html#SECTION00090000000000000000
On Thu, Nov 24, 2011 at 3:35 PM, Caroline Proux <karo@pasteur.fr> wrote:
Hi,I have illumina ChipSeq data and I want to use the "Draw quality score Boxplot" I run the"quality format converter (ASCII numeric)". But the "Draw quality score Boxplot" do an error "An error occurred running this job:Could not find/open font when opening font "arial", .."
where is my problem?
thank you so much
Caroline Proux
___________________________________________________________ The Galaxy User list should be used for the discussion of Galaxy analysis and other features on the public server at usegalaxy.org <http://usegalaxy.org>. Please keep all replies on the list by using "reply all" in your mail client. For discussion of local Galaxy instances and the Galaxy source code, please use the Galaxy Development list:
http://lists.bx.psu.edu/listinfo/galaxy-dev
To manage your subscriptions to this and other Galaxy lists, please use the interface at:
-- Avik Datta
On Tuesday, November 29, 2011, graham etherington (TSL) < graham.etherington@sainsbury-laboratory.ac.uk> wrote:
Caroline, I've had this problem before and find that although the job 'fails', the boxplot is actually created. If you click on the 'eye' in the boxplot history item, you should still be able to see and save your plot. Regards, Graham
Sounds like the font 'error' was really just a warning sent to stderr. Galaxy bug 325 strikes again ;-) https://bitbucket.org/galaxy/galaxy-central/issue/325/ Peter
participants (4)
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Avik Datta
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Caroline Proux
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graham etherington (TSL)
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Peter Cock