Call galaxy workflows as web service (or cmd line)?
I have a local install of Galaxy, and it would be very helpful if I could leverage Galaxy to help automate some analysis pipelines. Specifically via a web service'y interface (command line would work too). This does not appear possible in the current version, but It seems many features are enabled but not documented yet, so thought I'd check here. If it is in development, I'd be interested in helping out. Thanks! John
Hello John, I've opened the following ticket for this request, you can "follow" the ticket in bitbucket if you want. http://bitbucket.org/galaxy/galaxy-central/issue/208/call-galaxy-workflows-a... Thanks very much, Greg Von Kuster Galaxy Development Team John Major wrote:
I have a local install of Galaxy, and it would be very helpful if I could leverage Galaxy to help automate some analysis pipelines.+ Specifically via a web service'y interface (command line would work too).
This does not appear possible in the current version, but It seems many features are enabled but not documented yet, so thought I'd check here. If it is in development, I'd be interested in helping out.
Thanks! John
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John, We do not currently have this functionality, however if you would like to work on a REST api for calling workflows, we would definitely be interested in integrating it. It has been on out list for a while. Thanks, James On Oct 16, 2009, at 10:14 AM, Greg Von Kuster wrote:
Hello John,
I've opened the following ticket for this request, you can "follow" the ticket in bitbucket if you want.
http://bitbucket.org/galaxy/galaxy-central/issue/208/call-galaxy-workflows-a...
Thanks very much,
Greg Von Kuster Galaxy Development Team
John Major wrote:
I have a local install of Galaxy, and it would be very helpful if I could leverage Galaxy to help automate some analysis pipelines.+ Specifically via a web service'y interface (command line would work too).
This does not appear possible in the current version, but It seems many features are enabled but not documented yet, so thought I'd check here. If it is in development, I'd be interested in helping out.
Thanks! John
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_______________________________________________ galaxy-user mailing list galaxy-user@bx.psu.edu http://mail.bx.psu.edu/cgi-bin/mailman/listinfo/galaxy-user
participants (3)
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Greg Von Kuster
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James Taylor
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John Major