Hello, I am using the Galaxy server and I am trying to upload files. I do not see the FTP option even when logged in. Please advise. Best regards, Karen
Hi Karen, Help to use FTP is on this wiki. The screencasts both show the two step process. The first is to FTP the data to the server, the second is to move the data from the "Get Data -> Upload Data" tool form into your history. http://wiki.galaxyproject.org/FTPUpload Thanks! Jen Galaxy team On 7/29/13 4:05 PM, Karen Schwarzberg wrote:
Hello,
I am using the Galaxy server and I am trying to upload files. I do not see the FTP option even when logged in. Please advise.
Best regards, Karen
___________________________________________________________ The Galaxy User list should be used for the discussion of Galaxy analysis and other features on the public server at usegalaxy.org. Please keep all replies on the list by using "reply all" in your mail client. For discussion of local Galaxy instances and the Galaxy source code, please use the Galaxy Development list:
http://lists.bx.psu.edu/listinfo/galaxy-dev
To manage your subscriptions to this and other Galaxy lists, please use the interface at:
To search Galaxy mailing lists use the unified search at:
-- Jennifer Hillman-Jackson Galaxy Support and Training http://galaxyproject.org
I am uploading a file to the Main Galaxy and ... the speed as shown by FileZilla is 180KB/sec. I know from other work that my internet connection has 2MB/sec and usually does not go lower than 1 MB/sec. Is that normal, or is there a problem, and where is it, my system or Main? What should the speed be? Also, does anybody have experience with uploading to a Galaxy cloud instance? What's the speed there? ;-) does Main accept mailed-in hard drives? ;-) Gerald
Hello Gerald, The upload speed factors would be a combination of your internet connection and other concurrent incoming connections to the public Main server. Using Filezilla is a good choice. Successful transfer can be confirmed and should there be an interruption the transfer can be resumed. I cannot comment specifically on exact transfer speeds for cloud data, but this is something you could check in with Amazon about. However, on your own instance/storage bucket, you of course would not be sharing any dedicated bandwidth they specify with other end-users. Take care, Jen Galaxy team On 8/6/13 6:38 PM, Gerald Bothe wrote:
I am uploading a file to the Main Galaxy and ... the speed as shown by FileZilla is 180KB/sec. I know from other work that my internet connection has 2MB/sec and usually does not go lower than 1 MB/sec. Is that normal, or is there a problem, and where is it, my system or Main? What should the speed be? Also, does anybody have experience with uploading to a Galaxy cloud instance? What's the speed there? ;-) does Main accept mailed-in hard drives? ;-) Gerald
___________________________________________________________ The Galaxy User list should be used for the discussion of Galaxy analysis and other features on the public server at usegalaxy.org. Please keep all replies on the list by using "reply all" in your mail client. For discussion of local Galaxy instances and the Galaxy source code, please use the Galaxy Development list:
http://lists.bx.psu.edu/listinfo/galaxy-dev
To manage your subscriptions to this and other Galaxy lists, please use the interface at:
To search Galaxy mailing lists use the unified search at:
-- Jennifer Hillman-Jackson http://galaxyproject.org
participants (3)
-
Gerald Bothe -
Jennifer Jackson -
Karen Schwarzberg