Hi Steve,
J. Taylor (Galaxy team) created this wiki location to house such type
of efforts:
cheers,
Erick
On 24 March 2010 09:25, Steve Taylor <stephen.taylor(a)imm.ox.ac.uk> wrote:
Hi,
Just out of interest, is there a repository/Wiki page where all the XML conf
files for apps can be submitted? A Weblogo interface is a good example of
something that would benefit lots of people. I am sure there will be lots of
others instances of third party apps developed outside the main Galaxy team
in future (especially as Galaxy takes off!).
Steve
>
> iceLogo looks indeed very promising; however, in terms of integration
> to Galaxy, WebLogo (
http://code.google.com/p/weblogo/) seems to be
> much more straightforward?
>
> cheers,
> Erick
>
> On 23 March 2010 23:59, Pieter Neerincx <pieter.neerincx(a)gmail.com> wrote:
>>
>> I can recommend iceLogo too. Kind of sequence logos on steroids :). It's
>> a pretty young project and I found some graphical glitches in the interface,
>> but the developers respond very quickly :). They also offer iceLogo as a web
>> service that you can call remotely...
>>
>> Cheers,
>>
>> Pi
>>
>> On Mar 23, 2010, at 8:07 PM, Mary Mangan wrote:
>>
>>> We know people like weblogo:
http://weblogo.berkeley.edu/
>>>
>>> And I recently started using Icelogo:
>>>
http://iomics.ugent.be/icelogoserver/main.html
>>>
>>> But there are others out there, I know.
>>>
>>> Mary
>>>
>>> -----Original Message-----
>>> From: galaxy-user-bounces(a)lists.bx.psu.edu
>>> [mailto:galaxy-user-bounces@lists.bx.psu.edu] On Behalf Of Anton
>>> Nekrutenko
>>> Sent: Tuesday, March 23, 2010 2:31 PM
>>> To: Erick Antezana
>>> Cc: galaxy-user(a)bx.psu.edu
>>> Subject: Re: [galaxy-user] Sequence logo
>>>
>>> Erick:
>>>
>>> Not at the moment. Do you have any in mind?
>>>
>>> a.
>>>
>>>
>>> On Mar 23, 2010, at 6:33 AM, Erick Antezana wrote:
>>>
>>>> Hi,
>>>>
>>>> is there any Galaxy tool supporting the display of "sequence
logos"
>>>> (
http://en.wikipedia.org/wiki/Sequence_logo) ?
>>>>
>>>> thanks,
>>>> Erick
>>>> _______________________________________________
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>>>>
http://lists.bx.psu.edu/listinfo/galaxy-user
>>>
>>> Anton Nekrutenko
>>>
http://nekrut.bx.psu.edu
>>>
http://usegalaxy.org
>>>
>>>
>>>
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>>
>> -------------------------------------------------------------
>> mobile: +31 6 143 66 783
>> e-mail: pieter.neerincx(a)gmail.com
>> skype: pieter.online
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>>
>>
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>
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