There are no quotas set at this time, however for very large jobs we do
recommend using a cloud instance or your own local instance. Getting
Cloudman going should not be overly complicated - did you have trouble
with a particular part of the setup/execution we could help with?
It is also possible that this job simply was run at a time when the load
here was high. Have you been able to run the job successfully since you
originally wrote? Does the job complete when you break the larger 13m
line file into smaller chunks (could break up, do the join, then merge
again). Tools in Text Manipulation and a perhaps a Workflow could be
useful for this.
Please let us know how we can help,
On 3/18/11 8:22 AM, Keith E. Giles wrote:
I am trying to perform a "join" on two sets of intervals.
~20,000 intervals in one dataset and about 13 million on the other.
This has been running for about 3 days now, and I'm pretty certain
that its not going to work. Is there a way to know if there is enough
memory available for a given function to run ahead of time? Also, how
much storage space does each account have available?
I know that one can access cloud space online, through amazon for
example. However that seems to be fairly complicated and a bit out of
reach for me for the short term.
The Galaxy User list should be used for the discussion of
Galaxy analysis and other features on the public server
. Please keep all replies on the list by
using "reply all" in your mail client. For discussion of
local Galaxy instances and the Galaxy source code, please
use the Galaxy Development list:
To manage your subscriptions to this and other Galaxy lists,
please use the interface at: