Quantmap output issue (chemical names are truncated and cannot be differentiable from each other)
Hi, I have submitted chemicals to the QuantMap. The chemicals are successfully prepared by the "QuantMap Prep" and run by "QuantMap server". However, in the output files (dendrogram as well as the cluster information), all of the chemical names are truncated. Thus, some chemicals with identical truncated names cannot be differentiated from each other. I wonder if CIDs or full chemical names can be reported as well. Thank you, Jui-Hua
Hi Jui-Hua, You have reached the public Main Galaxy user help list. But my guess is that you are trying to reach the PredPharmTox public Galaxy instance, for help with their specific tools: http://wiki.galaxyproject.org/PublicGalaxyServers?highlight=%28QuantMap%29#P... I wasn't able to find contact information on the server itself or our wiki, but you could start with the publication authors for the tools, listed as contacts after the abstract here: http://bioinformatics.oxfordjournals.org/content/early/2013/07/04/bioinforma... If we have more specific contact information to share (is possible!), we'll add to the thread, Good luck! Jen Galaxy team On 11/20/13 3:33 PM, Hsieh, Jui-Hua (NIH/NIEHS) [E] wrote:
Hi,
I have submitted chemicals to the QuantMap. The chemicals are successfully prepared by the "QuantMap Prep" and run by "QuantMap server".
However, in the output files (dendrogram as well as the cluster information), all of the chemical names are truncated.
Thus, some chemicals with identical truncated names cannot be differentiated from each other.
I wonder if CIDs or full chemical names can be reported as well.
Thank you,
Jui-Hua
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participants (2)
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Hsieh, Jui-Hua (NIH/NIEHS) [E]
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Jennifer Jackson