I have the same problem with the BWA mapping tool (jobs waiting for run since Friday), but other tools (e.g. SAMtools) are working. My analysis also depends a lot on these mapping data! Debora
Message: 1 Date: Sat, 28 Sep 2013 16:47:01 +0000 From: "Yardley, Nathan" <ny2217@cumc.columbia.edu> To: "galaxy-user@lists.bx.psu.edu" <galaxy-user@lists.bx.psu.edu> Subject: Re: [galaxy-user] main galaxy server is down? Message-ID: <9633FF819ABAF94A82A38D94B64B664501291F43@SGWAEXM003.mc.cumc.columbia.edu>
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I'm wondering the same. I have a mapping job that hasn't moved into the queue since I put it there on Thursday. It's the last sample set I need to move forward with some analysis and I've been trying to get it for more than a week now. :/
Nathan ________________________________________ From: galaxy-user-bounces@lists.bx.psu.edu [galaxy-user-bounces@lists.bx.psu.edu] on behalf of Boaz Shaanan [bshaanan@bgu.ac.il] Sent: Friday, September 27, 2013 5:37 PM To: galaxy-user@lists.bx.psu.edu Subject: [galaxy-user] main galaxy server is down?
Hi,
Is the main galaxy server down? Or very sloooow? I have a Lastz job (not too demanding and one that has been run several times before) waiting for a long time already.
Thanks,
Boaz
Boaz Shaanan, Ph.D. Dept. of Life Sciences Ben-Gurion University of the Negev Beer-Sheva 84105 Israel
E-mail: bshaanan@bgu.ac.il Phone: 972-8-647-2220 Skype: boaz.shaanan Fax: 972-8-647-2992 or 972-8-646-1710
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-- Debora Garzetti, PhD Student AG Rakin Max von Pettenkofer-Institute, LMU Pettenkoferstraße 9A 80336 Munich E-mail: garzetti@mvp.uni-muenchen.de Phone: +49 (0)89 2180 72915
Hello Debora, As I just replied to the other similar post, performance should be improved by now on the main public Galaxy. Please allow your jobs to run if still queued and if any error due to fileserver or cluster issues, please simply re-run. Our apologies for these inconveniences, improvements are truly due very soon! Best, Jen Galaxy team On 9/30/13 3:08 AM, garzetti wrote:
I have the same problem with the BWA mapping tool (jobs waiting for run since Friday), but other tools (e.g. SAMtools) are working. My analysis also depends a lot on these mapping data!
Debora
-- Jennifer Hillman-Jackson http://galaxyproject.org
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