Daniel,
Great. That exactly and perfectly solves my problem!
Thanks so much.
Regards,
Curtis
From: Daniel Blankenberg [mailto:dan@bx.psu.edu]
Sent: Friday, July 08, 2011 10:25 AM
To: Robert Curtis Hendrickson
Cc: galaxy-user(a)lists.bx.psu.edu
Subject: Re: [galaxy-user] How to re-use a parameter in a workflow?
Hi Curtis,
In the workflow editor, you can specify a parameter name within the text boxes for the
tool inputs that you want to be set at runtime to the same value. This is done using
notation like "${A user entered value}", as seen in these screen shots:
[cid:image001.png@01CC3D87.DE617530]
[cid:image002.png@01CC3D87.DE617530]
Please let us know if we can provide further assistance.
Thanks for using Galaxy,
Dan
On Jul 5, 2011, at 3:15 PM, Robert Curtis Hendrickson wrote:
Galaxy Users,
I have a workflow where I'd like the user to input a value once, say a number of
nucleotides. That value would then be used as an input parameter to several different
tasks, for example, to two instances of "Operate on Genomic Intervals > Get
flanks" , where it would be used both for the "offset" and "length of
flanking regions(s)" in one instance, and it's value and it's *negative*
would be used for the second instance.
Thus, the user inputs "20", and Get_flanks(20,20) and Get_flanks(-20,20) get
run.
For this workflow, it's important that those parameters all be of the same magnitude,
or things will get messy later, so I don't want the user having to input them
separately, or to have to remember which one gets negated...
All suggestions welcome,
Curtis
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