Hello Alex,

Both of these are items under active development. The API is new and there is no formal documentation yet, but there is a readme: http://bitbucket.org/galaxy/galaxy-central/src/tip/scripts/api/README

Thanks, Jen Galaxy Team

On 7/28/10 2:55 PM, Alex Quezada wrote:

Two questions:

1. Is it possible to embed a workflow inside another workflow?

2. Is it possible to run a workflow via command line so that the execution could be automated? Say some other process produces the inputs, then command line or some other API (url maybe?) passes a reference to the inputs and kicks off the workflow. I found this, but no resolution:

http://bitbucket.org/galaxy/galaxy-central/issue/43/workflow-command-line-ex...

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Alex Quezada Software Developer Genome Science/Joint Genome Institute (B-6) Bioscience Division MS M888 Los Alamos National Laboratory Los Alamos, NM 87545

phone: (505) 606-2153 fax: (505) 665-3024 email: alexq@lanl.gov

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