Hello Sachit,

It looks like you installed this from the test tool shed since it is not available on the main tool shed. Assuming I've located the repository you installed, it looks like you'll have to manually add the following entry into your tool_data_table_conf.xml file. This should have been done automatically for you when you installed the repository, but I'm not sure why it didn't. Maybe you're running an older version of Galaxy that doesn't include this automated feature.

Greg Von Kuster

<!-- Locations of all bismark converted bs-seq references --> <table name="bismark_bs_indeces" comment_char="#"> <columns>value, dbkey, name, path</columns> <file path="tool-data/bismark_bs_indeces.loc" /> </table>

On Nov 29, 2012, at 4:41 AM, Sachit Adhikari wrote:

Hi all, I am seeing this error while clicking on Bismark in Galaxy. I got the Bismark for galaxy tool shed. I tried to get another bismark wrapper developed by Bjoern. I didnt know how to download that. What's the error? Thanks ___________________________________________________________ The Galaxy User list should be used for the discussion of Galaxy analysis and other features on the public server at usegalaxy.org. Please keep all replies on the list by using "reply all" in your mail client. For discussion of local Galaxy instances and the Galaxy source code, please use the Galaxy Development list:

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