Hello Curtis, Please see under "Shared Data" in the public Galaxy for examples that cover a range of analysis. For RNA-seq, this tutorial will likely be helpful (under "Shared Data -> Published Pages -> Galaxy RNA-seq Analysis Exercise"): http://main.g2.bx.psu.edu/u/jeremy/p/galaxy-rna-seq-analysis-exercise Thanks! Jen Galaxy team On 6/22/11 12:48 PM, Robert Curtis Hendrickson wrote:

Jen,

Are there any pages that give standard workflows for RNAseq, specifically analysis of alternate splicing? I'm not finding any examples, and it would be quite helpful.

Regards, Curtis

Research Associate Center for Clinical and Translational Science University of Alabama at Birmingham

-- Jennifer Jackson http://usegalaxy.org/ http://galaxyproject.org/