latest ubuntu version for full unified install
Hi, the cloud version is using Linux ip-10-68-42-15 2.6.32-308-ec2 #16-Ubuntu SMP Thu Sep 16 15:25:39 UTC 2010 x86_64 GNU/Linux what is the latest Ubuntu version we can use for a full unified install using the tool and data scripts to populate both tools and indexes? best, joseph
Hi Joseph, The scripts have only been tested and used with the Ubuntu 10.04 LTS that's being used on the cloud and Galaxy VM. There are some libraries that some of the tools require but overall the scripts are likely to work with never versions of the OS. If you device to try the new 11.04 please let us know how it goes. Enis On Thu, Jul 21, 2011 at 1:54 PM, Joseph Hargitai < joseph.hargitai@einstein.yu.edu> wrote:
Hi,
the cloud version is using Linux ip-10-68-42-15 2.6.32-308-ec2 #16-Ubuntu SMP Thu Sep 16 15:25:39 UTC 2010 x86_64 GNU/Linux
what is the latest Ubuntu version we can use for a full unified install using the tool and data scripts to populate both tools and indexes?
best, joseph
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Enis, since we are bringing up VMs locally we can try both - best, joe ________________________________ From: Enis Afgan [eafgan@emory.edu] Sent: Thursday, July 21, 2011 2:05 PM To: Joseph Hargitai Cc: galaxy-user@lists.bx.psu.edu Subject: Re: [galaxy-user] latest ubuntu version for full unified install Hi Joseph, The scripts have only been tested and used with the Ubuntu 10.04 LTS that's being used on the cloud and Galaxy VM. There are some libraries that some of the tools require but overall the scripts are likely to work with never versions of the OS. If you device to try the new 11.04 please let us know how it goes. Enis On Thu, Jul 21, 2011 at 1:54 PM, Joseph Hargitai <joseph.hargitai@einstein.yu.edu<mailto:joseph.hargitai@einstein.yu.edu>> wrote: Hi, the cloud version is using Linux ip-10-68-42-15 2.6.32-308-ec2 #16-Ubuntu SMP Thu Sep 16 15:25:39 UTC 2010 x86_64 GNU/Linux what is the latest Ubuntu version we can use for a full unified install using the tool and data scripts to populate both tools and indexes? best, joseph ___________________________________________________________ The Galaxy User list should be used for the discussion of Galaxy analysis and other features on the public server at usegalaxy.org<http://usegalaxy.org>. Please keep all replies on the list by using "reply all" in your mail client. For discussion of local Galaxy instances and the Galaxy source code, please use the Galaxy Development list: http://lists.bx.psu.edu/listinfo/galaxy-dev To manage your subscriptions to this and other Galaxy lists, please use the interface at: http://lists.bx.psu.edu/
Joseph We are already quite a while up and running the central and dist version on Ubuntu 10.10 x64 server without any problem. I didn't like the new desktop of 11 but it seemed to work without any trouble there as well... Please note the version of python in combination with R (if you want to use that) and its rpy... My 2ct, Alex Van: galaxy-user-bounces@lists.bx.psu.edu [mailto:galaxy-user-bounces@lists.bx.psu.edu] Namens Joseph Hargitai Verzonden: donderdag 21 juli 2011 19:55 Aan: galaxy-user@lists.bx.psu.edu Onderwerp: [galaxy-user] latest ubuntu version for full unified install Hi, the cloud version is using Linux ip-10-68-42-15 2.6.32-308-ec2 #16-Ubuntu SMP Thu Sep 16 15:25:39 UTC 2010 x86_64 GNU/Linux what is the latest Ubuntu version we can use for a full unified install using the tool and data scripts to populate both tools and indexes? best, joseph
participants (3)
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Bossers, Alex -
Enis Afgan -
Joseph Hargitai