Help need in troubleshooting cufflinks
Hi Team, This is Vijay from ELogic Technologies Pvt Ltd, Bangalore, India. 1. Using Galaxy local 2. NA 3. Galaxy was downloaded using the tar files 4. NA 5. When i tried to install Cufflinks into my system i am getting the following error. In file included from hits.h:21:0, from abundances.h:20, from differential.cpp:17: common.h: At global scope: common.h:25:25: error: ‘boost::BOOST_FOREACH’ has not been declared In file included from differential.h:29:0, from differential.cpp:18: replicates.h: In member function ‘bool ReplicatedBundleFactory::next_bundle(HitBundle&)’: replicates.h:141:50: warning: unused variable ‘s2’ [-Wunused-variable] differential.cpp: In member function ‘void TestLauncher::perform_testing(std::vector<boost::shared_ptr<SampleAbundances> >&)’: differential.cpp:111:31: warning: unused variable ‘s2’ [-Wunused-variable] differential.cpp: In function ‘void sample_abundance_worker(const string&, SampleAbundances&, HitBundle*, bool, bool)’: differential.cpp:704:41: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] make[2]: *** [differential.o] Error 1 make[2]: Leaving directory `/home/binet/Downloads/cufflinks-1.2.0/src' make[1]: *** [all-recursive] Error 1 make[1]: Leaving directory `/home/binet/Downloads/cufflinks-1.2.0' make: *** [all] Error 2 Even i have tried with various versions of cufflinks but i am getting the same error. Please kindly help me in getting out of this error. Thanks and Regards Vijay
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Vijay T