Data Uploading Time
Hi, My name Saranga and working for OSU. I just installed a local instant of Galaxy in one of our computers. My question is how long it takes to upload a file of size 4GB from my local disk to local Galaxy? I have been trying to upload this file for 12 hours now.This file is txt file and it contains reads. Any help will be really appreciated. Thank you very much in advance. Saranga
Hi, My name Saranga and working for OSU. I just installed a local instant of Galaxy in one of our computers. My question is how long it takes to upload a file of size 4GB from my local disk to local Galaxy? I have been trying to upload this file for 12 hours now.This file is txt file and it contains reads. Any help will be really appreciated. Thank you very much in advance. Saranga
saranga wijeratne wrote:
Hi, My name Saranga and working for OSU. I just installed a local instant of Galaxy in one of our computers. My question is how long it takes to upload a file of size 4GB from my local disk to local Galaxy?
Hi Saranga, Files > 2GB generally cannot be uploaded through the browser. This upload may have failed. We are working on better error handling and progress bars for uploads, but in the meantime, I would recommend placing your file on an HTTP or FTP site and uploading by placing the URL to the file in the URL/Text box. --nate
I have been trying to upload this file for 12 hours now.This file is txt file and it contains reads.
Any help will be really appreciated.
Thank you very much in advance.
Saranga
_______________________________________________ galaxy-user mailing list galaxy-user@lists.bx.psu.edu http://lists.bx.psu.edu/listinfo/galaxy-user
Hi Saranga here's a workaround using python serve files over http cd data-directory python -m SimpleHTTPServer 9914 open in firefox http://localhost:9914/ copy the urls and paste in galaxy upload file On Mon, Oct 25, 2010 at 9:38 PM, Nate Coraor <nate@bx.psu.edu> wrote:
saranga wijeratne wrote:
Hi, My name Saranga and working for OSU. I just installed a local instant of Galaxy in one of our computers. My question is how long it takes to upload a file of size 4GB from my local disk to local Galaxy?
Hi Saranga,
Files > 2GB generally cannot be uploaded through the browser. This upload may have failed. We are working on better error handling and progress bars for uploads, but in the meantime, I would recommend placing your file on an HTTP or FTP site and uploading by placing the URL to the file in the URL/Text box.
--nate
I have been trying to upload this file for 12 hours now.This file is txt file and it contains reads.
Any help will be really appreciated.
Thank you very much in advance.
Saranga
_______________________________________________ galaxy-user mailing list galaxy-user@lists.bx.psu.edu http://lists.bx.psu.edu/listinfo/galaxy-user
_______________________________________________ galaxy-user mailing list galaxy-user@lists.bx.psu.edu http://lists.bx.psu.edu/listinfo/galaxy-user
participants (3)
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Kevin Lam
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Nate Coraor
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saranga wijeratne