Hi, I was wondering whether there is a wiki page on the http://bitbucket.org/galaxy/galaxy-central site where I could find some detailed information about updating my local install of Galaxy? so far I have been regularly updating it by using mercurial (hg pull -u) However, it seems that some files are not properly updated ... (like the data cleaning/purging scripts).. Am I missing something? thanks in advance, Erick
Hello Erick, "hg pull -u" is the appropriate way to update your local repo with the latest from the Galaxy distribution. There are various reasons why some of you files may not be updated ( conflicts, changes to you local repo, etc ). You'll need to look at the hg log for potential problems when you update. Also, "hg help" will provide a list of the commands you can use with hg, some of which may help you determine problems in your repo if any exist. On Dec 16, 2009, at 4:06 AM, Erick Antezana wrote:
Hi,
I was wondering whether there is a wiki page on the http://bitbucket.org/galaxy/galaxy-central site where I could find some detailed information about updating my local install of Galaxy? so far I have been regularly updating it by using mercurial (hg pull -u) However, it seems that some files are not properly updated ... (like the data cleaning/purging scripts).. Am I missing something?
thanks in advance, Erick _______________________________________________ galaxy-user mailing list galaxy-user@lists.bx.psu.edu http://lists.bx.psu.edu/listinfo/galaxy-user
Greg Von Kuster Galaxy Development Team greg@bx.psu.edu
Hi Greg, there was indeed a conflict with a file from the FASTX tools. Now it is fixed. thanks Erick 2009/12/18 Greg Von Kuster <greg@bx.psu.edu>
Hello Erick,
"hg pull -u" is the appropriate way to update your local repo with the latest from the Galaxy distribution. There are various reasons why some of you files may not be updated ( conflicts, changes to you local repo, etc ). You'll need to look at the hg log for potential problems when you update. Also, "hg help" will provide a list of the commands you can use with hg, some of which may help you determine problems in your repo if any exist.
On Dec 16, 2009, at 4:06 AM, Erick Antezana wrote:
Hi,
I was wondering whether there is a wiki page on the http://bitbucket.org/galaxy/galaxy-central site where I could find some detailed information about updating my local install of Galaxy? so far I have been regularly updating it by using mercurial (hg pull -u) However, it seems that some files are not properly updated ... (like the data cleaning/purging scripts).. Am I missing something?
thanks in advance, Erick _______________________________________________ galaxy-user mailing list galaxy-user@lists.bx.psu.edu http://lists.bx.psu.edu/listinfo/galaxy-user
Greg Von Kuster Galaxy Development Team greg@bx.psu.edu
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