Hi Experts!
I uploaded my data (two pair-end fasq files from illumina), processed with fasq groomer, and then mapped processed data using a reference genome with Bowtie. I got strange errors I cannot possibly understand. None of the files have ind, wped, wsf, or wpf. Any idea?
WARNING:galaxy.datatypes.registry:Error loading datatype with extension 'ind': 'module' object has no attribute 'wsf' WARNING:galaxy.datatypes.registry:Error loading datatype with extension 'wped': 'module' object has no attribute 'wsf' WARNING:galaxy.datatypes.registry:Error loading datatype with extension 'wsf': 'module' object has no attribute 'wsf' WARNING:galaxy.datatypes.registry:Error loading datatype with extension 'wpf': 'module' object has no attribute 'wsf'
Thanks in advance.
Hello,
Yes, we have your bug report for same and will be responding.
Thanks!
Jen Galaxy team
On 7/19/12 4:13 PM, Hongkyun Kim wrote:
Hi Experts!
I uploaded my data (two pair-end fasq files from illumina), processed with fasq groomer, and then mapped processed data using a reference genome with Bowtie. I got strange errors I cannot possibly understand. None of the files have ind, wped, wsf, or wpf. Any idea?
WARNING:galaxy.datatypes.registry:Error loading datatype with extension 'ind': 'module' object has no attribute 'wsf' WARNING:galaxy.datatypes.registry:Error loading datatype with extension 'wped': 'module' object has no attribute 'wsf' WARNING:galaxy.datatypes.registry:Error loading datatype with extension 'wsf': 'module' object has no attribute 'wsf' WARNING:galaxy.datatypes.registry:Error loading datatype with extension 'wpf': 'module' object has no attribute 'wsf'
Thanks in advance. ___________________________________________________________ The Galaxy User list should be used for the discussion of Galaxy analysis and other features on the public server at usegalaxy.org. Please keep all replies on the list by using "reply all" in your mail client. For discussion of local Galaxy instances and the Galaxy source code, please use the Galaxy Development list:
http://lists.bx.psu.edu/listinfo/galaxy-dev
To manage your subscriptions to this and other Galaxy lists, please use the interface at:
galaxy-user@lists.galaxyproject.org